# biology/glimmer - The NetBSD Packages Collection

System for finding genes in microbial DNA

    Glimmer (Gene Locator and Interpolated Markov Modeler) is a system for finding
    genes in microbial DNA, especially the genomes of bacteria and archaea.
    Glimmer uses interpolated Markov models (IMMs) to identify the coding regions
    and  distinguish them from noncoding DNA. The IMM approach uses a combination
    of Markov models from 1st through 8th-order, weighting each model according to
    its predictive power.

- Source version: `glimmer-2.13nb1`
- Maintainer: pkgsrc-users AT NetBSD.org
- Website: ftp://ftp.tigr.org/pub/software/Glimmer/
- License: none stated
- Package history: cvs, hg, git

## Build dependencies

pkgtools/mktools pkgtools/cwrappers

## Runtime dependencies

(none)

## Binary packages

OS | Architecture | Version
--- | --- | ---
NetBSD 10.0 | aarch64 | glimmer-2.13nb1.tgz
NetBSD 10.0 | aarch64 | glimmer-2.13nb1.tgz
NetBSD 10.0 | aarch64eb | glimmer-2.13nb1.tgz
NetBSD 10.0 | alpha | glimmer-2.13nb1.tgz
NetBSD 10.0 | earmv4 | glimmer-2.13nb1.tgz
NetBSD 10.0 | earmv4 | glimmer-2.13nb1.tgz
NetBSD 10.0 | earmv6hf | glimmer-2.13nb1.tgz
NetBSD 10.0 | earmv6hf | glimmer-2.13nb1.tgz
NetBSD 10.0 | earmv7hf | glimmer-2.13nb1.tgz
NetBSD 10.0 | earmv7hf | glimmer-2.13nb1.tgz
NetBSD 10.0 | i386 | glimmer-2.13nb1.tgz
NetBSD 10.0 | i386 | glimmer-2.13nb1.tgz
NetBSD 10.0 | m68k | glimmer-2.13nb1.tgz
NetBSD 10.0 | powerpc | glimmer-2.13nb1.tgz
NetBSD 10.0 | powerpc | glimmer-2.13nb1.tgz
NetBSD 10.0 | powerpc | glimmer-2.13nb1.tgz
NetBSD 10.0 | sh3el | glimmer-2.13nb1.tgz
NetBSD 10.0 | sparc64 | glimmer-2.13nb1.tgz
NetBSD 10.0 | sparc64 | glimmer-2.13nb1.tgz
NetBSD 10.0 | vax | glimmer-2.13nb1.tgz
NetBSD 10.0 | x86_64 | glimmer-2.13nb1.tgz
NetBSD 10.0 | x86_64 | glimmer-2.13nb1.tgz
NetBSD 11.0 | aarch64 | glimmer-2.13nb1.tgz
NetBSD 11.0 | aarch64 | glimmer-2.13nb1.tgz
NetBSD 11.0 | aarch64eb | glimmer-2.13nb1.tgz
NetBSD 11.0 | aarch64eb | glimmer-2.13nb1.tgz
NetBSD 11.0 | earmv6hf | glimmer-2.13nb1.tgz
NetBSD 11.0 | earmv6hf | glimmer-2.13nb1.tgz
NetBSD 11.0 | earmv7hf | glimmer-2.13nb1.tgz
NetBSD 11.0 | earmv7hf | glimmer-2.13nb1.tgz
NetBSD 11.0 | i386 | glimmer-2.13nb1.tgz
NetBSD 11.0 | i386 | glimmer-2.13nb1.tgz
NetBSD 11.0 | m68k | glimmer-2.13nb1.tgz
NetBSD 11.0 | m68k | glimmer-2.13nb1.tgz
NetBSD 11.0 | powerpc | glimmer-2.13nb1.tgz
NetBSD 11.0 | riscv64 | glimmer-2.13nb1.tgz
NetBSD 11.0 | riscv64 | glimmer-2.13nb1.tgz
NetBSD 11.0 | riscv64 | glimmer-2.13nb1.tgz
NetBSD 11.0 | sh3el | glimmer-2.13nb1.tgz
NetBSD 11.0 | sh3el | glimmer-2.13nb1.tgz
NetBSD 11.0 | vax | glimmer-2.13nb1.tgz
NetBSD 11.0 | vax | glimmer-2.13nb1.tgz
NetBSD 11.0 | x86_64 | glimmer-2.13nb1.tgz
NetBSD 11.0 | x86_64 | glimmer-2.13nb1.tgz
NetBSD 9.0 | aarch64 | glimmer-2.13nb1.tgz
NetBSD 9.0 | aarch64 | glimmer-2.13nb1.tgz
NetBSD 9.0 | earmv6hf | glimmer-2.13nb1.tgz
NetBSD 9.0 | earmv6hf | glimmer-2.13nb1.tgz
NetBSD 9.0 | earmv7hf | glimmer-2.13nb1.tgz
NetBSD 9.0 | earmv7hf | glimmer-2.13nb1.tgz
NetBSD 9.0 | i386 | glimmer-2.13nb1.tgz
NetBSD 9.0 | m68k | glimmer-2.13nb1.tgz
NetBSD 9.0 | powerpc | glimmer-2.13nb1.tgz
NetBSD 9.0 | x86_64 | glimmer-2.13nb1.tgz

Binary packages can be installed with the high-level tool pkgin (which can be installed with pkg_add) or pkg_add(1) (installed by default). The NetBSD packages collection is also designed to permit easy installation from source.

## Available build options

(none)

## Known vulnerabilities

(no vulnerabilities known)

The pkg_admin audit command locates any installed package which has been mentioned in security advisories as having vulnerabilities.

Please note the vulnerabilities database might not be fully accurate, and not every bug is exploitable with every configuration.

Problem reports, updates or suggestions for this package should be reported with send-pr.